Lista delle Publicazioni Mario Francesco Pavone

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1 Lista delle Publicazioni Mario Francesco Pavone International Journals M. Pavone, G. Narzisi, G. Nicosia Clonal Selection - An Immunological Algorithm for Global Optimization over Continuous Spaces, Journal of Global Optimization, Vol. 53, No. 4, pp , V. Cutello, G. Nicosia, M. Pavone Protein Multiple Sequence Alignment by Hybrid Immunological Algorithms, Nucleic Acids Research, Oxford Journals, Vol. 39, No. 6, pp , V. Cutello, G. Morelli, G. Nicosia, M. Pavone and G. Scollo, On Discrete Models and Immunological Algorithms for Protein Structure Prediction, Natural Computing Journal, special issue on Modelling Bioprocesses, Vol. 10, No. 1, pp , 2011 (a Review Paper). V. Cutello, G. Nicosia, M. Pavone, An Immune Algorithm with Stochastic Aging and Kullback Entropy for the Chromatic Number Problem, Journal on Combinatorial Optimization, Vol. 14, No. 1, pp. 9-33, V. Cutello, G. Nicosia, M. Pavone, J. Timmis An Immune Algorithm for Protein Structure Prediction, IEEE Transaction on Evolutionary Computation, Vol. 11, No. 1, pp , Refereed Conference/Workshop Proceedings P. Consoli, and M. Pavone, O-BEE-COL: Optimal BEEs for COLoring Graphs, Biennial International Conference on Artificial Evolution (EA 2013), LNCS, Bordeaux, France, October 21-23, P. Consoli, A. Collerà, and M. Pavone, Swarm Intelligence Heuristics for Graph Coloring Problem, IEEE Congress on Evolutionary Computation (CEC 2013), Vol. 1, pp , Cancún, México, June 20-23, IEEE Press. V. Cutello, A. G. De Michele, and M. Pavone, Escaping Local Optima via Parallelization and Migration, 6th International Workshop on Nature Inspired Cooperative Strategies for Optimization (NICSO 2013), Studies in Computational Intelligence, Vol. 512, pp , Canterbury, UK, September 2-4, A. G. De Michele, and M. Pavone, Multi-Threaded Genetic Algorithm for Escaping Local Optima, 4th International Conference on Metaheuristics and Nature Inspired Computing (META 2012), Port El-Kantaoiui, tunisia, october 27-31, D. Agostini, J. Costanza, V. Cutello, L. Zammataro, N. Krasnogor, M. Pavone, and G. Nicosia, Effective Calibration of Artificial Gene Regulatory Networks, 20th European Conference on Artificial Life (ECAL 2011), pp , MIT Press, Paris, France, August 8-12, 2011.

2 G. Stracquadanio, R. Umeton, J. Costanza, V. Annibali, R. Mechelli, M. Pavone, L. Zammataro, and G. Nicosia, Large Scale Agent-Based Modeling of the Humoral and Cellular Immune Response, 10th International Conference on Artificial Immune Systems (ICARIS 2011), LNCS 6825, pp , Springer-Verlag, Cambridge, UK, July 18-21, J. Costanza, V. Cutello, and M. Pavone, A Memetic Immunological Algorithm for Resource Allocation Problem, 10th International Conference on Artificial Immune Systems (ICARIS 2011), LNCS 6825, pp , Springer-Verlag, Cambridge, UK, July 18-21, M. Pavone, P system Reverse Engineering for Gene Regulatory Networks in S-system Models, 8th International Conference on Complex Systems (ICCS 2011), New England Complex Systems Institute, pp , Quincy, MA, USA, June 26 - July 1, V. Cutello, G. Nicosia, M. Pavone, and G. Stracquadanio Entropic Divergence for Population Based Optimization Algorithms, IEEE World Congress on Computational Intelligence (WCCI 2010), Barcelona, Spain, July 18-23, IEEE Press. V. Cutello, G. Nicosia, M. Pavone and G. Stracquadanio, An Information Theoretic Approach for Clonal Selection Algorithms, 9th International Conference on Artificial Immune Systems (ICARIS 2010), Lecture Notes in Computer Science, Vol. 6209, pp , Edinburgh, UK, July 26-29, V. Cutello, G. Nicosia, M. Pavone, I. Prizzi, Proteomic Multiple Sequence Aligments: Refinement using an Immunological Local Search, Applied and Industrial Mathematics in Italy II (SIMAI), series on Advances in Mathematics for Applied Sciences, Vol. 75, pp , World Scientific, V. Cutello, N. Krasnogor, G. Nicosia, M. Pavone Immune Algorithm versus Differential Evolution: a Comparative Case Study using High Dimensional Function Optimization, International Conference on Adaptive and Natural Computing Algorithms (ICANNGA), Lecture Notes in Computer Science, Vol. 4431, pp , Warsaw, Poland, April, V. Cutello, D. Lee, G. Nicosia, M. Pavone, I. Prizzi, Aligning Multiple Protein Sequences by Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators, 5th International Conference on Artificial Immune Systems (ICARIS), Lecture Notes in Computer Science, Vol. 4163, pp , Instituto Gulbenkian de Ciência, Oeiras, Portugal, September 4-6, V. Cutello, D. Lee, S. Leone, G. Nicosia, M. Pavone, Clonal Selection Algorithm with Dynamic Population Size for Bimodal Search Spaces, 2nd International Conference on Natural Computation (ICNC), Lecture Notes in Computer Science, Vol. 4221, pp , Xi'an, China, September 24-28, V. Cutello, G. Narzisi, G. Nicosia, M. Pavone Real Coded Clonal Selection Algorithm for Global Numerical Optimization using a new Inversely Proportional Hypermutation Operator, 20th ACM Symposium on Applied Computing (SAC), ACM vol. 2, pp , Dijon, France, April 23-27, V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, An Immunological Algorithm for Global Numerical Optimization, 7th International Conference on Artificial Evolution (EA), Lecture Notes in Computer Science, Vol. 3871, pp , Lille, France, October 26-28, 2005.

3 V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, Clonal Selection Algorithms: A Comparative Case Study using Effective Mutation Potentials, 4th International Conference on Artificial Immune Systems, ICARIS 2005, Lecture Notes in Computer Science, Vol. 3627, pp , Banff, Alberta, Canada, August 14-17, V. Cutello, G. Morelli, G. Nicosia, M. Pavone, Immune Algorithms with Aging Operators for the String Folding Problem and the Protein Folding Problem, 5th European Conference on Evolutionary Computation in Combinatorial Optimization, EVOCOP 2005, Lecture Notes in Computer Science, Vol. 3448, pp , Lausanne, Switzerland, March 30 April 1, V. Cutello, G. Nicosia, M. Pavone, Exploring the Capability of Immune Algorithms: A Characterization of Hypermutation Operators, 3rd International Conference on Artificial Immune Systems, ICARIS 2004, Lecture Notes in Computer Science, Vol. 3239, pp , Catania, Italy, September 13-16, V. Cutello, G. Narzisi, G. Nicosia, M. Pavone, G. Sorace, How to Escape Traps Using Clonal Selection Algorithms, 1st International Conference on Informatics in Control, Automation and Robotics, ICINCO 2004, INSTICC Press, Vol. 1, pp , Setúbal, Portugal, August 25-28, 2004 (poster). V. Cutello, G. Nicosia, M. Pavone, An Immune Algorithm with Hyper-Macromutations for the Dill's 2D Hydrophobic-Hydrophilic Model, 2004 IEEE Congress on Evolutionary Computation, CEC 2004, IEEE Press, Vol. 1, pp , Portland, Oregon, June 19-20, V. Cutello, G. Nicosia, M. Pavone, A Hybrid Immune Algorithm with Information Gain for the Graph Coloring Problem, Genetic and Evolutionary Computation COnference, GECCO 2003, Lecture Notes in Computer Science, Vol. 2723, pp , Chicago, Illinois, July 12-16, A. Cincotti, V. Cutello, M. Pavone, Graph Partitioning with Genetic Algorithms using ODPX, 2002 IEEE Congress on Evolutionary Computation, CEC 2002, IEEE Press, pp , Honolulu, Hawaii, May 12-17, A. Cincotti, V. Cutello, F. Pappalardo, M. Pavone: GPEG: Graph Partitioning using evolutionary games, Proceedings of the 9th International Conference on Information Processing and Management of Uncertainly in Knowledge-Based Systems, IPMU 2002, Vol. 2, pp , Annecy, France, July 1-5, Editorials C. A. Coello Coello, G. Franco, N. Krasnogor, and M. Pavone, Editorial: Algorithms & Models for Complex Natural Systems, special issue on Natural Computing, 2014 (to appear). M. Pavone, and C. A. Coello Coello, Editorial: Optimization on Complex Systems, special issue on Memetic Computing, Vol. 4, No. 3, pp , N. Krasnogor, G. Nicosia, M. Pavone, and D.A. Pelta, Editorial: Nature Inspired Cooperative Strategies for Optimization, special issue on Natural Computing, Vol. 9, No. 1, pp. 1-3, 2010.

4 Book and Journal coedited P. Liò, O. Miglino, G. Nicosia, S. Nolfi and M. Pavone, Advances in Artificial Life ECAL 2013, proceedings of the 12th European Conference on Artificial Life, MIT Press, C. A. Coello Coello, V. Cutello, K. Deb, S. Forrest, G. Nicosia, and M. Pavone, 12th International Conference on Parallel Problem Solving from Nature PPSN 2012, Lecture Notes in Computer Science - Part I, Vol. 7491, Springer-Verlag, C.A. Coello Coello, V. Cutello, K. Deb, S. Forrest, G. Nicosia, and M. Pavone, 12th International Conference on Parallel Problem Solving from Nature PPSN 2012, Lecture Notes in Computer Science - Part II, Vol. 7492, Springer-Verlag, M. Pavone, and C. A. Coello Coello, Optimization on Complex Systems, Memetic Computing, Vol. 4, issue 3, C. A. Coello Coello, J. Greensmith, N. Krasnogor, P. Liò, G. Nicosia, and M. Pavone, 11th International Conference on Artificial Immune Systems ICARIS 2012, Lecture Notes in Computer Science, Vol. 7597, Springer-Verlag, N. Krasnogor, G. Nicosia, M. Pavone, D. Pelta, Nature Inspired Cooperative Strategies for Optimization, Natural Computing, Vol. 8, issue 4, N. Krasnogor, G. Nicosia, M. Pavone, D. Pelta, 2nd International Workshop on Nature Inspired Cooperative Strategies for Optimization NICSO2007, book series on Studies in Computational Intelligence, Vol. 129, Springer-Verlag, Refereed Abstracts/Communications under Reviewers and with Proceedings P. Consoli, A. Collerà and M. Pavone, Which Artificial Colony Seems to Be Most Suitable for Coloring a Map?, 11th Workshop on Advances in Continuous Optimization (EUROPT 2013), Florence, Italy, June, P. Consoli, and M. Pavone, Artificial Bee Colony for Graph Coloring Problem, 26th European Conference on Operational Research (EURO INFORMS MMXIII), Rome, Italy, 1-4 July, A. G. De Michele and M. Pavone, Multi-Threaded Genetic Algorithm for Escaping Local Optima, 10th Workshop on Advances in Continuous Optimization (EUROPT), Siauliai, Lithuania, July 5-7, 2012 M. Pavone, Parameters Optimization in S-System Models using Population-based Reverse Engineering Methods, SIAM Conference on OPTIMIZATION (OP11), Darmstadt, Germany, May 16-19, M. Pavone and N. Krasnogor, A Memetic Clonal Selection Algorithm for a Combinatorial Optimziation, 8th EUROPT Workshop Advances in Continuous Optimization, satellite events of European Conference on Operational Research (EURO XXIV), Lisbon, Portugal, July 11-14, 2010.

5 M. Pavone and N. Krasnogor, Bio-Inspired Reverse Engineering Methodologies to Infer the Gene Regulatory Networks, 24th European Conference on Operational Research (EURO XXIV), special session on Natural Computation in BioInformatics, Lisbon, Portugal, July 11-14, V. Cutello, G. Nicosia and M. Pavone, Optimization Algorithms for the Protein Structure Prediction Problem, 24th European Conference on Operational Research (EURO XXIV), special session on Natural Computation in BioInformatics, Lisbon, Portugal, July 11-14, Refereed Abstracts/Communications under Reviewers and without Proceedings V. Cutello, G. Nicosia, M. Pavone Robust Immunological Algorithm for High-Dimensional Global Opimization, VI Italian Workshop on Artificial Life and Evolutionary Computation, Naples, Italy, November 23-25, V. Cutello, G. Nicosia, M. Pavone A Hybrid Immunological Algorithm for Combinatorial Optimization Problems, VI Italian Workshop on Artificial Life and Evolutionary Computation, Naples, Italy, November 23-25, Italian Journals G. Nicosia, M. Giacobini, M. Pavone, L. Vanneschi, Workshop Italiano di Vita Artificiale e Computazione Evolutiva (WIVACE 2007), Sistemi Intelligenti, Società editrice Il Mulino, a.xx, n.2/agosto Best Regards dr. Mario F. Pavone

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