Olympus Time-lapse Microscope Basic operation

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Olympus Time-lapse Microscope Basic operation To start up the microscope 1. Switch on the Olympus UCB. (label as ) 1 Power Switch 2 2. Switch on the MT10. (label as ) Power Switch Page 1 of 18

3 3. Switch on the camera. (label as ) Power Switch 4 4. Turn on the Computer. (label as ) 5. Start Xcellence Pro in the computer. (Continue on next page) Page 2 of 18

6. After started the Xcellence Pro, you will see the control panel. 1 2 3 4 5 4. Microscope control 1. Image Buffer 2. Viewport for viewing image or live view from camera 3. Camera control 5. illumination system control Page 3 of 18

Introduction of the Xcellence Pro control panel In 3. Camera control panel, you can control the camera and capture image. Button for capture an image Button for switch on Live View Binning selection Exposure time switch Brightness adjustment -Define the maximum and minimum brightness value to show in image Page 4 of 18

In 4. Microscope control panel, you can control the microscope. Objectives Switch - Switch different objective Condenser Switch - Switch different condenser Lamp Switch - Switch to turn On/Off lamp and changing intensity Lamp shutter Switch - Turn On/Off shutter to stop illumination Eyepiece & Camera Switch - Toggle between the microscope eyepiece and camera Imaging filter Switch - For user switch to different filter set Page 5 of 18

In 5. Illumination system control panel. Burner Switch Start the Burner if you need to capture fluorescence image Shutter Switch - Stop the excitation for a short period to avoid Bleaching of your sample Intensity Switch - Adjust the burner intensity level Page 6 of 18

To capture fluorescence multi-channel image 1. Switch on the burner in 5. Illumination system control panel if you need to capture fluorescence image. 2. Switch on the lamp in 4. Microscope control if you need to capture DIC image. 3. Switch the microscope view to camera in 4. Microscope control. 4. Select live view in 3. Camera control. 5. Select the image filter you need to use for your image in 4. Microscope control. 6. Select the objective you want and get the correct focus of your image. To focus your image, use the focus knob at the microscope stand. Button to lower the objective, use when switching between 20X & 40X objective Focus knob Button to switch between Coarse/Fine modes 7. Click Capture to get your image, the captured image will store at image buffer. Page 7 of 18

8. Repeat Step 4 to Step 7 to capture another image. 9. To merge the images you have captured, select one of the images you want to merge in image buffer, then select Image combine. Select the image(s) you need to merge and then click OK. The merged image will be stored at image buffer. 10. To save your image(s) store at image buffer, select the image want to save and then choose File Save as to save your image. (Please save your file at D:/User/your name ) To use experiment manager to capture fluorescence multi-channel, time lapse and Z-stack image 1. Open your database by select Database Open. (If you do not have a database, select Database Administration New database. In the New database window, enter your name and save your database in D:/User/your name, Then press Next followed by Finish ) Enter your name Save in D:/User/your name 2. Open the Experiment Manager. Page 8 of 18

3. After select Experiment Manager, the Experiment Manager Panel is open. 1. Command box 2. Execution Control 3. Drawing Bracket 4. Experiment Setting 1. Command Box Image Capture Multi-color Time-lapse Z-stack Auto-focus 2. Execution Control Verification Preparation Run Pause Stop Page 9 of 18

4. To design the image experiment, drag the command box into the 3. Drawing bracket. 4a/ For multi-color imaging i. Click and drag into drawing bracket. E.g. If you need to have 4 color images, ii. drag 4 into the drawing bracket. Connect the command with arrow(s). Set the image capture value in the experiment setting for each command. You can use Get Current Device setting to get the current capture value iii. Click and drag the multi-color frame into the drawing bracket, the frame should include all the capture command boxes. Multi-color frame should include all the command boxes Arrows connect the capture command boxes Page 10 of 18

4b/ For Time-lapse imaging (For time-lapse imaging, you may need to use the incubator, the steps to install the incubator at page 14) i. Click and drag into drawing bracket. Change the setting at the 4.experiment setting. ii. Click and drag the time lapse frame into the drawing bracket, the frame should include all the capture command boxes. iii. Click the time lapse frame; change the setting in the 4.experiment setting. iv. User can also use auto-focus in time-lapse capture. Click and drag into the drawing bracket. Connect the command with arrow(s). (The auto-focus only available for 20X and 40X objective only. Also ensure you have pushed the ZDC stick at the microscope stand to in position.) Page 11 of 18

4c/ For Z-stack imaging i. Click and drag into drawing bracket. Change the setting the experiment setting. ii. Click and drag the Z-stack frame into the drawing bracket, the frame should include all the capture command boxes. iii. Click the Z-stack frame; Change the setting in the 4.experiment setting. Page 12 of 18

User can also make different combination of experiment command they need. 5. After drawing the experiment plan, select to verify the experiment plan. If the plan has error, message will be display. Please modify the plan and verify again. 6. If the plan does not have any problem, select to allow the system to prepare the experiment. 7. Select to run the experiment plan after preparation is complete. When the experiment plan is running, you can Pause or Stop the plan any time. 8. After the experiment plan finish, you image file will be store at the 1.image buffer. To save your image at image buffer, select the image want to save and then choose File Save as to save your image. For time-lapse video, you can save the video by choosing File Export to AVI. (Please save your file at D:/User/your name ) Page 13 of 18

To install the incubator for time-lapse imaging 1. Raise the microscope arm gently. 2. Remove the metal plate from the stage. 3. Remove the slide clips from the stage. Page 14 of 18

4. Get the incubator from the plastic tray (Label as A), put it on the stand. It should fit into the hole on the stage. 5. Use the key to install the screws in order to fix the incubator on the stage. 6. Add 50mL autoclaved water into the incubator with the falcon tube carefully. 7. Switch on the heater. (Label as B) Do not change any setting of the heater. Power Switch Page 15 of 18

8. Turn on the CO 2 mixture gas under the table. The gas flow pressure should set at 15 psi. DO NOT OVER 15 psi Meter showing gas level Turn On Main switch Turn on Regulator switch 9. Place your culture dish into the incubator. 30 minutes is needed to allow the temperature reaching equilibrium. 10. Lower the microscope arm gently. To remove the incubator after time-lapse imaging 1. Switch off the heater. (Label as B) Do not change any setting of the heater. 2. Turn off the CO 2 mixture gas under the table. DO NOT OVER 15 psi Meter showing gas level Turn Off Main switch Turn off Regulator switch Page 16 of 18

3. Use the key to remove the screws in order to un-mount the incubator on the stage. 4. Remove the water from the incubator carefully. Use the plastic container to collect the water. Use paper towel to dry the incubator. 5. Put the incubator back to the tray (Label as A). 6. Install the metal plate and slide clips on to the stage. 7. Lower the microscope arm gently. Page 17 of 18

To turning off the microscope 1. Ensure you have saved all the images in the image buffer. All images in the buffer will be deleted after the Xcellence program is closed. 2. Turn off the burner before closing the Xcellence program. (Important!) 3. Close the Xcellence program. 4. Shut down the computer. 5. Switch off the Olympus UCB. (label as ) 2 6. Switch off the MT10. (label as ) 7. Switch off the camera. (label as ) 8. Sign the log sheet before you leave. 3 1 End Page 18 of 18